Contrasting distribution patterns between aquatic and terrestrial Phytophthora species along a climatic gradient are linked to functional traits.
Identifieur interne : 000816 ( Main/Exploration ); précédent : 000815; suivant : 000817Contrasting distribution patterns between aquatic and terrestrial Phytophthora species along a climatic gradient are linked to functional traits.
Auteurs : Miguel A. Redondo [Suède] ; Johanna Boberg [Suède] ; Jan Stenlid [Suède] ; Jonàs Oliva [Suède, Espagne]Source :
- The ISME journal [ 1751-7370 ] ; 2018.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Phytophthora.
- parasitologie : Maladies des plantes, Plantes.
- physiologie : Phytophthora.
- Changement climatique, Environnement, Géographie, Phylogenèse, Température.
English descriptors
- KwdEn :
- MESH :
- genetics : Phytophthora.
- parasitology : Plant Diseases, Plants.
- physiology : Phytophthora.
- Climate Change, Environment, Geography, Phylogeny, Temperature.
Abstract
Diversity of microbial organisms is linked to global climatic gradients. The genus Phytophthora includes both aquatic and terrestrial plant pathogenic species that display a large variation of functional traits. The extent to which the physical environment (water or soil) modulates the interaction of microorganisms with climate is unknown. Here, we explored the main environmental drivers of diversity and functional trait composition of Phytophthora communities. Communities were obtained by a novel metabarcoding setup based on PacBio sequencing of river filtrates in 96 river sites along a geographical gradient. Species were classified as terrestrial or aquatic based on their phylogenetic clade. Overall, terrestrial and aquatic species showed contrasting patterns of diversity. For terrestrial species, precipitation was a stronger driver than temperature, and diversity and functional diversity decreased with decreasing temperature and precipitation. In cold and dry areas, the dominant species formed resistant structures and had a low optimum temperature. By contrast, for aquatic species, temperature and water chemistry were the strongest drivers, and diversity increased with decreasing temperature and precipitation. Within the same area, environmental filtering affected terrestrial species more strongly than aquatic species (20% versus 3% of the studied communities, respectively). Our results highlight the importance of functional traits and the physical environment in which microorganisms develop their life cycle when predicting their distribution under changing climatic conditions. Temperature and rainfall may be buffered differently by water and soil, and thus pose contrasting constrains to microbial assemblies.
DOI: 10.1038/s41396-018-0229-3
PubMed: 30072746
PubMed Central: PMC6246556
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Redondo</name><affiliation wicri:level="1"><nlm:affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden. miguel.angel.redondo@slu.se.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Boberg, Johanna" sort="Boberg, Johanna" uniqKey="Boberg J" first="Johanna" last="Boberg">Johanna Boberg</name><affiliation wicri:level="1"><nlm:affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Stenlid, Jan" sort="Stenlid, Jan" uniqKey="Stenlid J" first="Jan" last="Stenlid">Jan Stenlid</name><affiliation wicri:level="1"><nlm:affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation></author><author><name sortKey="Oliva, Jonas" sort="Oliva, Jonas" uniqKey="Oliva J" first="Jonàs" last="Oliva">Jonàs Oliva</name><affiliation wicri:level="1"><nlm:affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</nlm:affiliation><country xml:lang="fr">Suède</country><wicri:regionArea>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala</wicri:regionArea><wicri:noRegion>Uppsala</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Crop and Forest Sciences, Agrotecnio center CERCA, University of Lleida, Alcalde Rovira Roure, 191, 25198, Lleida, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Crop and Forest Sciences, Agrotecnio center CERCA, University of Lleida, Alcalde Rovira Roure, 191, 25198, Lleida</wicri:regionArea><wicri:noRegion>Lleida</wicri:noRegion></affiliation></author></analytic><series><title level="j">The ISME journal</title><idno type="eISSN">1751-7370</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Climate Change (MeSH)</term><term>Environment (MeSH)</term><term>Geography (MeSH)</term><term>Phylogeny (MeSH)</term><term>Phytophthora (genetics)</term><term>Phytophthora (physiology)</term><term>Plant Diseases (parasitology)</term><term>Plants (parasitology)</term><term>Temperature (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Changement climatique (MeSH)</term><term>Environnement (MeSH)</term><term>Géographie (MeSH)</term><term>Maladies des plantes (parasitologie)</term><term>Phylogenèse (MeSH)</term><term>Phytophthora (génétique)</term><term>Phytophthora (physiologie)</term><term>Plantes (parasitologie)</term><term>Température (MeSH)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Maladies des plantes</term><term>Plantes</term></keywords><keywords scheme="MESH" qualifier="parasitology" xml:lang="en"><term>Plant Diseases</term><term>Plants</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Climate Change</term><term>Environment</term><term>Geography</term><term>Phylogeny</term><term>Temperature</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Changement climatique</term><term>Environnement</term><term>Géographie</term><term>Phylogenèse</term><term>Température</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Diversity of microbial organisms is linked to global climatic gradients. The genus Phytophthora includes both aquatic and terrestrial plant pathogenic species that display a large variation of functional traits. The extent to which the physical environment (water or soil) modulates the interaction of microorganisms with climate is unknown. Here, we explored the main environmental drivers of diversity and functional trait composition of Phytophthora communities. Communities were obtained by a novel metabarcoding setup based on PacBio sequencing of river filtrates in 96 river sites along a geographical gradient. Species were classified as terrestrial or aquatic based on their phylogenetic clade. Overall, terrestrial and aquatic species showed contrasting patterns of diversity. For terrestrial species, precipitation was a stronger driver than temperature, and diversity and functional diversity decreased with decreasing temperature and precipitation. In cold and dry areas, the dominant species formed resistant structures and had a low optimum temperature. By contrast, for aquatic species, temperature and water chemistry were the strongest drivers, and diversity increased with decreasing temperature and precipitation. Within the same area, environmental filtering affected terrestrial species more strongly than aquatic species (20% versus 3% of the studied communities, respectively). Our results highlight the importance of functional traits and the physical environment in which microorganisms develop their life cycle when predicting their distribution under changing climatic conditions. Temperature and rainfall may be buffered differently by water and soil, and thus pose contrasting constrains to microbial assemblies.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">30072746</PMID><DateCompleted><Year>2019</Year><Month>06</Month><Day>25</Day></DateCompleted><DateRevised><Year>2020</Year><Month>03</Month><Day>09</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1751-7370</ISSN><JournalIssue CitedMedium="Internet"><Volume>12</Volume><Issue>12</Issue><PubDate><Year>2018</Year><Month>12</Month></PubDate></JournalIssue><Title>The ISME journal</Title><ISOAbbreviation>ISME J</ISOAbbreviation></Journal><ArticleTitle>Contrasting distribution patterns between aquatic and terrestrial Phytophthora species along a climatic gradient are linked to functional traits.</ArticleTitle><Pagination><MedlinePgn>2967-2980</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/s41396-018-0229-3</ELocationID><Abstract><AbstractText>Diversity of microbial organisms is linked to global climatic gradients. The genus Phytophthora includes both aquatic and terrestrial plant pathogenic species that display a large variation of functional traits. The extent to which the physical environment (water or soil) modulates the interaction of microorganisms with climate is unknown. Here, we explored the main environmental drivers of diversity and functional trait composition of Phytophthora communities. Communities were obtained by a novel metabarcoding setup based on PacBio sequencing of river filtrates in 96 river sites along a geographical gradient. Species were classified as terrestrial or aquatic based on their phylogenetic clade. Overall, terrestrial and aquatic species showed contrasting patterns of diversity. For terrestrial species, precipitation was a stronger driver than temperature, and diversity and functional diversity decreased with decreasing temperature and precipitation. In cold and dry areas, the dominant species formed resistant structures and had a low optimum temperature. By contrast, for aquatic species, temperature and water chemistry were the strongest drivers, and diversity increased with decreasing temperature and precipitation. Within the same area, environmental filtering affected terrestrial species more strongly than aquatic species (20% versus 3% of the studied communities, respectively). Our results highlight the importance of functional traits and the physical environment in which microorganisms develop their life cycle when predicting their distribution under changing climatic conditions. Temperature and rainfall may be buffered differently by water and soil, and thus pose contrasting constrains to microbial assemblies.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Redondo</LastName><ForeName>Miguel A</ForeName><Initials>MA</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-6383-5457</Identifier><AffiliationInfo><Affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden. miguel.angel.redondo@slu.se.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Boberg</LastName><ForeName>Johanna</ForeName><Initials>J</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-1300-8883</Identifier><AffiliationInfo><Affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Stenlid</LastName><ForeName>Jan</ForeName><Initials>J</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-5344-2094</Identifier><AffiliationInfo><Affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Oliva</LastName><ForeName>Jonàs</ForeName><Initials>J</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-2418-2542</Identifier><AffiliationInfo><Affiliation>Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 07, Uppsala, Sweden.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Crop and Forest Sciences, Agrotecnio center CERCA, University of Lleida, Alcalde Rovira Roure, 191, 25198, Lleida, 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Redondo</name></noRegion><name sortKey="Boberg, Johanna" sort="Boberg, Johanna" uniqKey="Boberg J" first="Johanna" last="Boberg">Johanna Boberg</name><name sortKey="Oliva, Jonas" sort="Oliva, Jonas" uniqKey="Oliva J" first="Jonàs" last="Oliva">Jonàs Oliva</name><name sortKey="Stenlid, Jan" sort="Stenlid, Jan" uniqKey="Stenlid J" first="Jan" last="Stenlid">Jan Stenlid</name></country><country name="Espagne"><noRegion><name sortKey="Oliva, Jonas" sort="Oliva, Jonas" uniqKey="Oliva J" first="Jonàs" last="Oliva">Jonàs Oliva</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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